Bibliography for Fundamental Topics in Immunology B. BIOL4185 BETA

Arbore, G. et al. (2016) ‘T helper 1 immunity requires complement-driven NLRP3 inflammasome activity in CD4+ T cells’, Science, 352(6292), pp. aad1210–aad1210. Available at: https://doi.org/10.1126/science.aad1210.

Banchereau, J., Pascual, V. and O’Garra, A. (2012) ‘From IL-2 to IL-37: the expanding spectrum of anti-inflammatory cytokines’, Nature Immunology, 13(10), pp. 925–931. Available at: https://doi.org/10.1038/ni.2406.

Basu, R., Hatton, R.D. and Weaver, C.T. (2013) ‘The Th17 family: flexibility follows function’, Immunological Reviews, 252(1), pp. 89–103. Available at: https://doi.org/10.1111/imr.12035.

Baumgarth, N. (2013) ‘Innate-Like B Cells and Their Rules of Engagement’, in P.D. Katsikis, S.P. Schoenberger, and B. Pulendran (eds) Crossroads Between Innate and Adaptive Immunity IV. New York, NY: Springer New York, pp. 57–66. Available at: https://doi.org/10.1007/978-1-4614-6217-0_7.

Bilate, A.M. and Lafaille, J.J. (2012) ‘Induced CD4                              Foxp3                              Regulatory T Cells in Immune Tolerance’, Annual Review of Immunology, 30(1), pp. 733–758. Available at: https://doi.org/10.1146/annurev-immunol-020711-075043.

Braun, A. et al. (2011) ‘Afferent lymph–derived T cells and DCs use different chemokine receptor CCR7–dependent routes for entry into the lymph node and intranodal migration’, Nature Immunology, 12(9), pp. 879–887. Available at: https://doi.org/10.1038/ni.2085.

Bravo-Blas, A., Wessel, H. and Milling, S. (2016) ‘Microbiota and arthritis’, Current Opinion in Rheumatology [Preprint]. Available at: https://doi.org/10.1097/BOR.0000000000000261.

Cerutti, A., Cols, M. and Puga, I. (2013) ‘Marginal zone B cells: virtues of innate-like antibody-producing lymphocytes’, Nature Reviews Immunology, 13(2), pp. 118–132. Available at: https://doi.org/10.1038/nri3383.

Cerutti, A., Puga, I. and Magri, G. (2013) ‘The B cell helper side of neutrophils’, Journal of Leukocyte Biology, 94(4), pp. 677–682. Available at: https://doi.org/10.1189/jlb.1112596.

Chu, H. et al. (2016) ‘Gene-microbiota interactions contribute to the pathogenesis of inflammatory bowel disease’, Science, 352(6289), pp. 1116–1120. Available at: https://doi.org/10.1126/science.aad9948.

Costello, E.K. et al. (2009) ‘Bacterial Community Variation in Human Body Habitats Across Space and Time’, Science, 326(5960), pp. 1694–1697. Available at: https://doi.org/10.1126/science.1177486.

Curotto de Lafaille, M.A. and Lafaille, J.J. (2009) ‘Natural and Adaptive Foxp3+ Regulatory T Cells: More of the Same or a Division of Labor?’, Immunity, 30(5), pp. 626–635. Available at: https://doi.org/10.1016/j.immuni.2009.05.002.

Cyster, J.G. (2010) ‘B cell follicles and antigen encounters of the third kind’, Nature Immunology, 11(11), pp. 989–996. Available at: https://doi.org/10.1038/ni.1946.

Duan, S. and Thomas, P.G. (2016) ‘Balancing Immune Protection and Immune Pathology by CD8+ T-Cell Responses to Influenza Infection’, Frontiers in Immunology, 7. Available at: https://doi.org/10.3389/fimmu.2016.00025.

Durbin, R.K., Kotenko, S.V. and Durbin, J.E. (2013) ‘Interferon induction and function at the mucosal surface’, Immunological Reviews, 255(1), pp. 25–39. Available at: https://doi.org/10.1111/imr.12101.

Förster, R., Davalos-Misslitz, A.C. and Rot, A. (2008) ‘CCR7 and its ligands: balancing immunity and tolerance’, Nature Reviews Immunology, 8(5), pp. 362–371. Available at: https://doi.org/10.1038/nri2297.

Garraud, O. et al. (2012) ‘Revisiting the B-cell compartment in mouse and humans: more than one B-cell subset exists in the marginal zone and beyond’, BMC Immunology, 13(1). Available at: https://doi.org/10.1186/1471-2172-13-63.

Giltiay, N.V., Chappell, C.P. and Clark, E.A. (2012) ‘B-cell selection and the development of autoantibodies’, Arthritis Research & Therapy, 14(Suppl 4). Available at: https://doi.org/10.1186/ar3918.

Jameson, S.C. and Masopust, D. (2009) ‘Diversity in T Cell Memory: An Embarrassment of Riches’, Immunity, 31(6), pp. 859–871. Available at: https://doi.org/10.1016/j.immuni.2009.11.007.

Josefowicz, S.Z., Lu, L.-F. and Rudensky, A.Y. (2012) ‘Regulatory T Cells: Mechanisms of Differentiation and Function’, Annual Review of Immunology, 30(1), pp. 531–564. Available at: https://doi.org/10.1146/annurev.immunol.25.022106.141623.

Li, M.O. and Rudensky, A.Y. (2016) ‘T cell receptor signalling in the control of regulatory T cell differentiation and function’, Nature Reviews Immunology, 16(4), pp. 220–233. Available at: https://doi.org/10.1038/nri.2016.26.

Liston, A. and Gray, D.H.D. (2014) ‘Homeostatic control of regulatory T cell diversity’, Nature Reviews Immunology, 14(3), pp. 154–165. Available at: https://doi.org/10.1038/nri3605.

Mowat, A.McI. (2003) ‘Anatomical basis of tolerance and immunity to intestinal antigens’, Nature Reviews Immunology, 3(4), pp. 331–341. Available at: https://doi.org/10.1038/nri1057.

Mueller, S.N. et al. (2013) ‘Memory T Cell Subsets, Migration Patterns, and Tissue Residence’, Annual Review of Immunology, 31(1), pp. 137–161. Available at: https://doi.org/10.1146/annurev-immunol-032712-095954.

Mueller, S.N. and Mackay, L.K. (2015) ‘Tissue-resident memory T cells: local specialists in immune defence’, Nature Reviews Immunology, 16(2), pp. 79–89. Available at: https://doi.org/10.1038/nri.2015.3.

Murphy, K.M. and Stockinger, B. (2010) ‘Effector T cell plasticity: flexibility in the face of changing circumstances’, Nature Immunology, 11(8), pp. 674–680. Available at: https://doi.org/10.1038/ni.1899.

Nibbs, R.J.B. and Graham, G.J. (2013) ‘Immune regulation by atypical chemokine receptors’, Nature Reviews Immunology, 13(11), pp. 815–829. Available at: https://doi.org/10.1038/nri3544.

Nierkens, S. et al. (2013) ‘Antigen cross-presentation by dendritic cell subsets: one general or all sergeants?’, Trends in Immunology, 34(8), pp. 361–370. Available at: https://doi.org/10.1016/j.it.2013.02.007.

‘ORIGINS OF CD4  EFFECTOR AND CENTRAL MEMORY T CELLS’ (no date) Nature immunology, 12(6). Available at: http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4212218/.

O’Shea, J.J., Holland, S.M. and Staudt, L.M. (2013) ‘JAKs and STATs in Immunity, Immunodeficiency, and Cancer’, New England Journal of Medicine, 368(2), pp. 161–170. Available at: https://doi.org/10.1056/NEJMra1202117.

Pillai, S. and Cariappa, A. (2009) ‘The follicular versus marginal zone B lymphocyte cell fate decision’, Nature Reviews Immunology, 9(11), pp. 767–777. Available at: https://doi.org/10.1038/nri2656.

Poon, I.K.H. et al. (2014) ‘Apoptotic cell clearance: basic biology and therapeutic potential’, Nature Reviews Immunology, 14(3), pp. 166–180. Available at: https://doi.org/10.1038/nri3607.

Reiner, S.L., Sallusto, F. and Lanzavecchia, A. (2007) ‘Division of Labor with a Workforce of One: Challenges in Specifying Effector and Memory T Cell Fate’, Science, 317(5838), pp. 622–625. Available at: https://doi.org/10.1126/science.1143775.

Rosser, E.C., Blair, P.A. and Mauri, C. (2014) ‘Cellular targets of regulatory B cell-mediated suppression’, Molecular Immunology, 62(2), pp. 296–304. Available at: https://doi.org/10.1016/j.molimm.2014.01.014.

Sakaguchi, S. et al. (2010) ‘FOXP3+ regulatory T cells in the human immune system’, Nature Reviews Immunology, 10(7), pp. 490–500. Available at: https://doi.org/10.1038/nri2785.

Sakaguchi, S. et al. (2013) ‘The plasticity and stability of regulatory T cells’, Nature Reviews Immunology, 13(6), pp. 461–467. Available at: https://doi.org/10.1038/nri3464.

Schmidt, S.V., Nino-Castro, A.C. and Schultze, J.L. (2012) ‘Regulatory dendritic cells: there is more than just immune activation’, Frontiers in Immunology, 3. Available at: https://doi.org/10.3389/fimmu.2012.00274.

Schumann, K. et al. (2010) ‘Immobilized Chemokine Fields and Soluble Chemokine Gradients Cooperatively Shape Migration Patterns of Dendritic Cells’, Immunity, 32(5), pp. 703–713. Available at: https://doi.org/10.1016/j.immuni.2010.04.017.

Shaikh, S.R. et al. (2015) ‘The effects of diet-induced obesity on B cell function’, Clinical & Experimental Immunology, 179(1), pp. 90–99. Available at: https://doi.org/10.1111/cei.12444.

Shevach, E.M. (2009) ‘Mechanisms of Foxp3+ T Regulatory Cell-Mediated Suppression’, Immunity, 30(5), pp. 636–645. Available at: https://doi.org/10.1016/j.immuni.2009.04.010.

Shih, H.-Y. et al. (2014) ‘Transcriptional and epigenetic networks of helper T and innate lymphoid cells’, Immunological Reviews, 261(1), pp. 23–49. Available at: https://doi.org/10.1111/imr.12208.

SpringerLink (Online service) (2014) Transcriptional control of lineage differentiation in immune cells. Edited by W. Ellmeier and I. Taniuchi. Cham: Springer. Available at: http://ezproxy.lib.gla.ac.uk/login?url=http://dx.doi.org/10.1007/978-3-319-07395-8.

Tanoue, T., Atarashi, K. and Honda, K. (2016) ‘Development and maintenance of intestinal regulatory T cells’, Nature Reviews Immunology, 16(5), pp. 295–309. Available at: https://doi.org/10.1038/nri.2016.36.

Ulvmar, M.H. et al. (2014) ‘The atypical chemokine receptor CCRL1 shapes functional CCL21 gradients in lymph nodes’, Nature Immunology, 15(7), pp. 623–630. Available at: https://doi.org/10.1038/ni.2889.

Vazquez, M.I., Catalan-Dibene, J. and Zlotnik, A. (2015) ‘B cells responses and cytokine production are regulated by their immune microenvironment’, Cytokine, 74(2), pp. 318–326. Available at: https://doi.org/10.1016/j.cyto.2015.02.007.

Vinuesa, C.G. et al. (2010) ‘T cells and follicular dendritic cells in germinal center B-cell formation and selection’, Immunological Reviews, 237(1), pp. 72–89. Available at: https://doi.org/10.1111/j.1600-065X.2010.00937.x.

Vinuesa, C.G., Sanz, I. and Cook, M.C. (2009) ‘Dysregulation of germinal centres in autoimmune disease’, Nature Reviews Immunology, 9(12), pp. 845–857. Available at: https://doi.org/10.1038/nri2637.

Weber, M. et al. (2013) ‘Interstitial Dendritic Cell Guidance by Haptotactic Chemokine Gradients’, Science, 339(6117), pp. 328–332. Available at: https://doi.org/10.1126/science.1228456.

Weiner, H.L. et al. (2011) ‘Oral tolerance’, Immunological Reviews, 241(1), pp. 241–259. Available at: https://doi.org/10.1111/j.1600-065X.2011.01017.x.

Wherry, E.J. (2011) ‘T cell exhaustion’, Nature Immunology, 131(6), pp. 492–499. Available at: https://doi.org/10.1038/ni.2035.

Williams, M.A. and Bevan, M.J. (2007) ‘Effector and Memory CTL Differentiation’, Annual Review of Immunology, 25(1), pp. 171–192. Available at: https://doi.org/10.1146/annurev.immunol.25.022106.141548.

Xing, Y. and Hogquist, K.A. (2012) ‘T-Cell Tolerance: Central and Peripheral’, Cold Spring Harbor Perspectives in Biology, 4(6), pp. a006957–a006957. Available at: https://doi.org/10.1101/cshperspect.a006957.

Yamane, H. and Paul, William E (2012a) ‘Cytokines of the γc family control CD4+ T cell differentiation and function’, Nature Immunology, 13(11), pp. 1037–1044. Available at: https://doi.org/10.1038/ni.2431.

Yamane, H. and Paul, William E (2012b) ‘Cytokines of the γc family control CD4+ T cell differentiation and function’, Nature Immunology, 13(11), pp. 1037–1044. Available at: https://doi.org/10.1038/ni.2431.

Yamane, H. and Paul, William E. (2012) ‘Memory CD4+ T Cells: fate determination, positive feedback and plasticity’, Cellular and Molecular Life Sciences, 69(10), pp. 1577–1583. Available at: https://doi.org/10.1007/s00018-012-0966-9.

Yamane, H. and Paul, W.E. (2013) ‘Early signaling events that underlie fate decisions of naive CD4                              T cells toward distinct T-helper cell subsets’, Immunological Reviews, 252(1), pp. 12–23. Available at: https://doi.org/10.1111/imr.12032.

Yu, D. and Vinuesa, C.G. (2010) ‘The elusive identity of T follicular helper cells’, Trends in Immunology, 31(10), pp. 377–383. Available at: https://doi.org/10.1016/j.it.2010.07.001.

Zhou, L., Chong, M.M.W. and Littman, D.R. (2009) ‘Plasticity of CD4+ T Cell Lineage Differentiation’, Immunity, 30(5), pp. 646–655. Available at: https://doi.org/10.1016/j.immuni.2009.05.001.

Zhu, J., Yamane, H. and Paul, W.E. (2010) ‘Differentiation of Effector CD4 T Cell Populations’, Annual Review of Immunology, 28(1), pp. 445–489. Available at: https://doi.org/10.1146/annurev-immunol-030409-101212.