1.
Lodish HF. Molecular cell biology. 7th ed., international ed. New York: W.H. Freeman and Company; 2013.
2.
Alberts B. Molecular biology of the cell. Sixth edition. New York, NY: Garland Science, Taylor and Francis Group; 2015.
3.
Krebs JE, Goldstein ES, Kilpatrick ST. Lewin’s genes XII. 12th ed. Burlington, Mass: Jones & Bartlett Learning; 2018.
4.
Calladine CR. 1. Understanding DNA: the molecule & how it works. 3rd ed. San Diego, Calif: Academic; 2004.
5.
Watson JD, Crick FHC. 2. A Structure for Deoxyribose Nucleic Acid. 1953; Available from: https://ezproxy.lib.gla.ac.uk/login?url=https://www.nature.com/articles/171737a0.pdf
6.
Nelson HCM, Finch JT, Luisi BF, Klug A. 3. The structure of an oligo(dA)-oligo(dT) tract and its biological implications. Nature [Internet]. 1987 Nov 19;330(6145):221–226. Available from: http://ezproxy.lib.gla.ac.uk/login?url=https://www.nature.com/nature/journal/v330/n6145/abs/330221a0.html
7.
Hänsel-Hertsch R, Di Antonio M, Balasubramanian S. 4. DNA G-quadruplexes in the human genome: detection, functions and therapeutic potential. Nature Reviews Molecular Cell Biology. 2017 Feb 22;18(5):279–284.
8.
Chandrasekaran AR, Anderson N, Kizer M, Halvorsen K, Wang X. 5. Beyond the Fold: Emerging Biological Applications of DNA Origami. ChemBioChem. 2016 Jun 16;17(12):1081–1089.
9.
Rohs R, Jin X, West SM, Joshi R, Honig B, Mann RS. 6. Origins of Specificity in Protein-DNA Recognition. Annual Review of Biochemistry. 2010 Jun 7;79(1):233–269.
10.
Rice PA, Yang S wei, Mizuuchi K, Nash HA. 7. Crystal Structure of an IHF-DNA Complex: A Protein-Induced DNA U-Turn. Cell. 1996 Dec;87(7):1295–1306.
11.
Bogdanove AJ, Bohm A, Miller JC, Morgan RD, Stoddard BL. Engineering altered protein–DNA recognition specificity. Nucleic Acids Research. 2018 Jun 1;46(10):4845–4871.
12.
Hille F, Richter H, Wong SP, Bratovič M, Ressel S, Charpentier E. The Biology of CRISPR-Cas: Backward and Forward. Cell. 2018 Mar;172(6):1239–1259.
13.
Gilbert N, Allan J. Supercoiling in DNA and chromatin. Current Opinion in Genetics & Development. 2014 Apr;25:15–21.
14.
Schoeffler AJ, Berger JM. 11. DNA topoisomerases: harnessing and constraining energy to govern chromosome topology. Quarterly Reviews of Biophysics. 2008 Feb;41(01).
15.
Nogales E, Louder RK, He Y. 12. Structural Insights into the Eukaryotic Transcription Initiation Machinery. Annual Review of Biophysics. 2017 May 22;46(1):59–83.
16.
Nudler E. 13. RNA Polymerase Active Center: The Molecular Engine of Transcription. Annual Review of Biochemistry. 2009 Jun;78(1):335–361.
17.
Lelli KM, Slattery M, Mann RS. 14. Disentangling the Many Layers of Eukaryotic Transcriptional Regulation. Annual Review of Genetics. 2012 Dec 15;46(1):43–68.
18.
Rowley MJ, Corces VG. Organizational principles of 3D genome architecture. Nature Reviews Genetics. 2018 Dec;19(12):789–800.
19.
Clapier CR, Iwasa J, Cairns BR, Peterson CL. 16. Mechanisms of action and regulation of ATP-dependent chromatin-remodelling complexes. Nature Reviews Molecular Cell Biology. 2017 May 17;18(7):407–422.
20.
Uhlmann F. 17. SMC complexes: from DNA to chromosomes. Nature Reviews Molecular Cell Biology. 2016 Apr 14;17(7):399–412.
21.
Pomerantz RT, O’Donnell M. 18. Replisome mechanics: insights into a twin DNA polymerase machine. Trends in Microbiology. 2007 Apr;15(4):156–164.
22.
Renkawitz J, Lademann CA, Jentsch S. 19. Mechanisms and principles of homology search during recombination. Nature Reviews Molecular Cell Biology. 2014 May 14;15(6):369–383.
23.
Kaniecki K, De Tullio L, Greene EC. A change of view: homologous recombination at single-molecule resolution. Nature Reviews Genetics. 2017 Dec 11;19(4):191–207.
24.
Wigley DB. 21. Bacterial DNA repair: recent insights into the mechanism of RecBCD, AddAB and AdnAB. Nature Reviews Microbiology. 2012 Dec 3;11(1):9–13.
25.
Lesbats P, Engelman AN, Cherepanov P. 23. Retroviral DNA Integration. Chemical Reviews. 2016 Oct 26;116(20):12730–12757.
26.
Liu D, Keijzers G, Rasmussen LJ. 24. DNA mismatch repair and its many roles in eukaryotic cells. Mutation Research/Reviews in Mutation Research. 2017 Jul;773:174–187.
27.
Goodarzi AA, Jeggo PA. 25. The Repair and Signaling Responses to DNA Double-Strand Breaks. Adv Genet [Internet]. Elsevier; 2013;82:1–45. Available from: http://ezproxy.lib.gla.ac.uk/login?url=http://linkinghub.elsevier.com/retrieve/pii/B9780124076761000019
28.
Marteijn JA, Lans H, Vermeulen W, Hoeijmakers JHJ. 26. Understanding nucleotide excision repair and its roles in cancer and ageing. Nature Reviews Molecular Cell Biology. 2014 Jun 23;15(7):465–481.
29.
Pennisi E. DNA’s Cast of Thousands. Science. 2003 Apr 11;300(5617):282–285.
30.
Abe N, Dror I, Yang L, Slattery M, Zhou T, Bussemaker HJ, Rohs R, Mann RS. Deconvolving the Recognition of DNA Shape from Sequence. Cell. 2015 Apr;161(2):307–318.
31.
Swinger KK, Rice PA. IHF and HU: flexible architects of bent DNA. Current Opinion in Structural Biology. 2004 Feb;14(1):28–35.
32.
Ledford H. Five big mysteries about CRISPR’s origins. Nature. 2017 Jan 12;541(7637):280–282.
33.
Adli M. The CRISPR tool kit for genome editing and beyond. Nature Communications. 2018 Dec;9(1).
34.
Chen SH, Chan NL, Hsieh T shih. New Mechanistic and Functional Insights into DNA Topoisomerases. Annual Review of Biochemistry. 2013 Jun 2;82(1):139–170.
35.
Tessarz P, Kouzarides T. Histone core modifications regulating nucleosome structure and dynamics. Nature Reviews Molecular Cell Biology. 2014 Oct 15;15(11):703–708.
36.
Doublié S, Zahn KE. Structural insights into eukaryotic DNA replication. Frontiers in Microbiology. 2014 Aug 25;5.
37.
West SC. The search for a human Holliday junction resolvase. Biochemical Society Transactions. 2009 Jun 1;37(3):519–526.
38.
Montaño SP, Rice PA. Moving DNA around: DNA transposition and retroviral integration. Current Opinion in Structural Biology. 2011 Jun;21(3):370–378.
39.
Modrich P. Mechanisms in                              and Human Mismatch Repair (Nobel Lecture). Angewandte Chemie International Edition. 2016 Jul 18;55(30):8490–8501.
40.
Deindl S, Hwang WL, Hota SK, Blosser TR, Prasad P, Bartholomew B, Zhuang X. ISWI Remodelers Slide Nucleosomes with Coordinated Multi-Base-Pair Entry Steps and Single-Base-Pair Exit Steps. Cell. 2013 Jan;152(3):442–452.
41.
Graham JE, Marians KJ, Kowalczykowski SC. Independent and Stochastic Action of DNA Polymerases in the Replisome. Cell. 2017 Jun;169(7):1201-1213.e17.
42.
Terakawa T, Bisht S, Eeftens JM, Dekker C, Haering CH, Greene EC. The condensin complex is a mechanochemical motor that translocates along DNA. Science. 2017 Nov 3;358(6363):672–676.
43.
Jia R, Chai P, Zhang H, Fan X. Novel insights into chromosomal conformations in cancer. Molecular Cancer. 2017 Dec;16(1).
44.
M Ryan Corces et al. The chromatin accessibility landscape of primary human cancers. Science [Internet]. 2018; Available from: http://science.sciencemag.org/content/362/6413/eaav1898.long
45.
Wright AV, Liu JJ, Knott GJ, Doxzen KW, Nogales E, Doudna JA. Structures of the CRISPR genome integration complex. Science. 2017 Sep 15;357(6356):1113–1118.
46.
Ludmil B Alexandrov et al. Mutational signatures associated with tobacco smoking in human cancer. Mutational signatures associated with tobacco smoking in human cancer [Internet]. 2016; Available from: http://ezproxy.lib.gla.ac.uk/login?url=http://science.sciencemag.org/content/354/6312/618.long
47.
Ludmil B Alexandrov. Understanding the origins of human cancer. Science [Internet]. 2018; Available from: http://science.sciencemag.org/content/350/6265/1175.1.long
48.
Zhao W, Steinfeld JB, Liang F, Chen X, Maranon DG, Jian Ma C, Kwon Y, Rao T, Wang W, Sheng C, Song X, Deng Y, Jimenez-Sainz J, Lu L, Jensen RB, Xiong Y, Kupfer GM, Wiese C, Greene EC, Sung P. BRCA1–BARD1 promotes RAD51-mediated homologous DNA pairing. Nature. 2017 Oct 4;550(7676):360–365.
49.
Cejka P. Biochemistry: Complex assistance for DNA invasion. Nature. 2017 Oct 4;